Microarray Papers of Note (Nov. — Dec. 2006)
Journal Title Authors
American Journal of Medical Genetics, Part A.
2006 Dec 15;140(24):2757-67.
Detection of low-level mosaicism by array CGH in routine diagnostic specimens. Ballif BC,
et al.
Analytical Chemistry.
2006 Nov 15;78(22):7610-5.
MChip: a tool for influenza surveillance. Dawson, ED,
et al.
Bioinformatics.
2006 Dec 1;22(23):2955-7.
NMPP: a user-customized NimbleGen microarray data processing pipeline. Wang X,

et al.
Bioinformatics.
2006 Dec 12; [Epub ahead of print]
Functional genomics via multiscale analysis: application to gene expression and ChIP-on-chip data. Lerman G,
et al.
Bioinformatics.
2006 Nov 1;22(21):2697-8.
ArrayFusion: a web application for multi-dimensional analysis of CGH, SNP and microarray data. Yang TP,
et al.
Biostatistics.
2006 Dec 12; [Epub ahead of print]
When should one subtract background fluorescence in two color microarrays? Scharpf RB,
et al.
BMC Bioinformatics.
2006 Dec 15;7(1):533 [Epub ahead of print]
Effect of various normalization methods on Applied Biosystems expression array system data. Barbacioru CC,
et al.
BMC Bioinformatics.
2006 Nov 30;7:521.
Dynamic variable selection in SNP genotype autocalling from APEX microarray data. Podder M,
et al.
BMC Biotechnology.
2006 Dec 12;6:47.
Target labelling for the detection and profiling of microRNAs expressed in CNS tissue using microarrays. Saba R,
et al.
BMC Genomics.
2006 Dec 27;7(1):325 [Epub ahead of print]
Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array. Gardina, PJ,
et al.
Carcinogenesis.
2006 Dec;27(12):2409-23.
Comprehensive DNA methylation profiling in a human cancer genome identifies novel epigenetic targets. Ordway JM,
et al.
Child's Nervous System.
2006 Nov;22(11):1419-25.
Genome-wide microRNA profiling in human fetal nervous tissues by oligonucleotide microarray. Zhao JJ,
et al.
Clinical Cancer Research.
2006 Nov 1;12(21):6459-68.
Classification of breast cancer using genetic algorithms and tissue microarrays. Dolled-Filhart M,
et al.
European Journal of Human Genetics.
2006 Nov 22; [Epub ahead of print]
Detection of small genomic imbalances using microarray-based multiplex amplifiable probe hybridization. Patsalis PC,
et al.
Gastroenterology.
2006 Dec;131(6):1913-24.
Recurrent genomic alterations with impact on survival in colorectal cancer identified by genome-wide array comparative genomic hybridization. Kim MY,
et al.
Journal of Clinical Microbiology.
2006 Nov 15; [Epub ahead of print]
Fast DNA-serotyping of Escherichia coli by oligonucleotide microarray. Ballmer K,
et al.
Journal of Histochemistry and Cytochemistry.
2006 Dec;54(12):1413-23.
Analysis of protein expression in cell microarrays: a tool for antibody-based proteomics. Andersson AC,
et al.
Journal of Histochemistry and Cytochemistry.
2006 Nov;54(11):1229-37.
Preliminary comparison of quantity, quality, and microarray performance of RNA extracted from formalin-fixed, paraffin-embedded, and unfixed frozen tissue samples. Scicchitano MS,
et al.
Journal of Medical Genetics.
2006 Nov 14; [Epub ahead of print]
Development of a genotyping microarray for Usher syndrome. Cremers FP,
et al.
Journal of Molecular Diagnostics.
2006 Nov;8(5):528-33.
Application of array-based comparative genomic hybridization to clinical diagnostics. Beijani B,
et al.
Journal of Neuropathology and Experimental Neurology.
2006 Nov;65(11):1031-9.
The application of microarray technology to neuropathology: cutting edge tool with clinical diagnostics potential or too much information? McShea A,
et al.
Molecular & Cellular Proteomics.
2006 Nov;5(11):2102-13.
Disease state differentiation and identification of tuberculosis biomarkers via native antigen array profiling. Sartain MJ,
et al.
Nature Biotechnology.
2006 Nov;24(11):1429-35.
Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities. Berger MF,
et al.
Nature Methods.
2006 Dec;3(12):966.
Overcoming protein diversity on arrays. Rusk N,
et al.
Nature Methods.
2006 Nov;3(11):903-7.
Stacking the deck: double-tiled DNA microarrays. Wheelan
SJ, et al.
Nucleic Acids Research.
2006 Dec 20; [Epub ahead of print]
The Stanford Microarray Database: implementation of new analysis tools and open source release of software. Demeter J,
et al.
Proteomics.
2006 Nov;6(21):5720-4.
Autoantigen arrays for multiplex analysis of antibody isotypes. Graham KL,
et al.
Radiation Research.
2006 Nov;166(5):746-56.
Novel microarray-based method for estimating exposure to ionizing radiation. Gruel G,
et al.
Veterinary Journal.
2006 Nov;172(3):473-81.
Microarray-based detection and typing of foot-and-mouth disease virus. Baxi MK,
et al.
World Journal of Gastroenterology.
2006 Nov 21;12(43):6998-7006.
mRNA expression, functional profiling and multivariate classification of colon biopsy specimen by cDNA overall glass microarray Galamb O, et al.