NIH Grants in Bioinformatics Awarded August - September, 2007 (part 2of 2)
Principal Investigator Institution Project Title Start Date End Date NIH Institute FY 2007 Funding
Kent, William University of California,
Santa Cruz
The UCSC ENCODE Data Coordination Center
Sept. 28, 2007
June 30, 2011
NHGRI
$1,275,000
Kloczkowski, Andrzej Iowa State University High-Accuracy Protein Models Derived from Lower Resolution Data
Sept. 15, 2007
Aug. 31, 2010
NIGMS
$248,049
Korf, Ian University of California,
Davis
Advances in Computational Gene Finding
Sept. 1, 2007
June 30, 2012
NHGRI
$290,000
Li, Xiaoman Indiana University/Purdue University at Indianapolis Discovery of Cis-regulatory Modules in Human Genome
Sept. 24, 2007
July 31, 2010
NHGRI
$311,083
Liang, Jie University of Illinois at Chicago High-Accuracy Models of Proteins from Remote Homology
Sept. 15, 2007
Aug. 31, 2010
NIGMS
$279,686
Loots, Gabriela University of California/Lawrence Livermore National Lab Deciphering Principles of Regulatory Genomics
Sept. 29, 2007
Aug. 31, 2011
NHGRI
$305,003
Mathews, David University of Rochester Innovations in RNA Structure Prediction
Sept. 25, 2007
Aug. 31, 2012
NHGRI
$340,000
Mendes, Pedro Virginia Polytechnic Institute and State University COPASI: Biochemical Network Modeling and Simulation Software
Sept. 1, 2007
Aug. 31, 2011
NIGMS
$506,834
Merchant, Fatima Soft Imaging A Virtual Reality Environment for Genomic Data Visualization
Sept. 13, 2007
Aug. 31, 2008
NIGMS
$123,706
Mooney, Sean Indiana University/Purdue University at Indianapolis Informatic Profiling of Clinically Relevant Mutation
Sept. 30, 2007
Sept. 29, 2011
NLM
$329,240
Park, Peter Children's Hospital Boston Integrative Analysis of Multiple Genomic Data Sets
Sept. 25, 2007
Aug. 31, 2012
NIGMS
$295,750
Reynolds, Kristen Pharmacogenetics Diagnostic Laboratories Development of a Personalized Medicine Interface for the Safe and Effective Treatment
Aug. 16, 2007
Feb. 15, 2008
NHLBI
$115,534
Rhodes, Daniel Compendia Bioscience Development of Oncomine Professional as a Platform for Biopharmaceutical Research
Sept. 30, 2007
Jan. 31, 2008
NCI
$179,109
Rock, Christopher Texas Tech University Computational Analysis of Causality between miRNAs and antisense transcription
Sept. 28, 2007
Aug. 31, 2009
NIGMS
$186,321
Roden, Dan9 Vanderbilt University Vanderbilt Genome-Electronic Records Project
Sept. 28, 2007
July 31, 2011
NHGRI
$1,588,44
Sasinowski, Maciek Incogen Visual Programming Tool for Integration of Gene and Protein Cancer Profiling Data
Sept. 1, 2007
Feb. 29, 2008
NCI
$150,314
Sauro, Herbert University of Washington Continued Development and Maintenance of the Systems Biology Workbench
Aug. 2, 2007
July 31, 2010
NIGMS
$192,368
Slonim, Donna Tufts University Medford Evaluating Biological Networks by Mining Public Data
Sept. 30, 2007
Sept. 29, 2009
NLM
$181,052
Smith, Paul Kansas State University Accurate Simulations of Peptide Aggregation
Sept. 1, 2007
Aug. 31, 2012
NIGMS
$219,000
Vitkup, Dennis Columbia University Health Sciences Computational Annotation of Orphan Metabolic Activities
Sept. 14, 2007
June 30, 2010
NIGMS
$364,130
Wall, Jeffrey

University of California,
San Francisco

Simulation algorithms for genome-wide data and application to admixed data
Aug. 16, 2007
June 30, 2010
NHGRI
$320,000
Zhang, Michael Cold Spring Harbor Laboratory Computational and experimental modeling of RNA Splicing
Aug. 13, 2007
July 31, 2011
NIGMS
$318,804
Zhi, Degui University of California,
Berkeley
Algorithms for protein superfamily classification and function prediction
Sept. 15, 2007
June 30, 2009
NCRR
$73,440
Zoellner, Sebastian University of Michigan at Ann Arbor Computational Statistic Approaches to Gene-Environment Interaction
Sept. 21, 2007
July 31, 2010
NHLBI
$372,200
Zolnai, Zsolt University of Wisconsin,
Madison
Development, Evaluation, and Testing of the Sesame LIMS
Sept. 1, 2007
July 31, 2012
NIGMS
$275,728