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Sequencing-Related
Papers of Note, February 2007
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| Authors | Title | Citation |
| Binladen J, Gilbert MT, Bollback JP, et al. | The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. | PLoS
ONE. 2007 Feb 14;2:e197. |
| Cai F, Chen H, Hicks CB, et al. | Detection of minor drug-resistant populations by parallel allele-specific sequencing. | Nat
Methods. 2007 Feb;4(2):123-5. Epub 2007 Jan 7. |
| Chen Y, Johnson JA, Pusch GD, et al. | The genome of non-O1 Vibrio Cholerae NRT36S demonstrates the presence of pathogenic mechanisms that are distinct from O1 Vibrio Cholerae. | Infect
Immun. 2007 Feb 5; [Epub ahead of print] |
| Fahlgren N, Howell MD, Kasschau KD, et al. | High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes. | PLoS
ONE. 2007 Feb 14;2:e219. |
| Friedlaender JS, Friedlaender FR, Hodgson JA, et al. | Melanesian mtDNA complexity. | PLoS
ONE. 2007 Feb 28;2:e248 |
| Heinze B. | A database of PCR primers for the chloroplast genomes of higher plants. | Plant
Methods. 2007 Feb 27;3(1):4 [Epub ahead of print] |
| Hofreiter M, Munzel S, Conard NJ, et al. | Sudden replacement of cave bear mitochondrial DNA in the late Pleistocene. | Curr
Biol. 2007 Feb 20;17(4):R122-3. |
| Jo K, Dhingra DM, Odijk T, et al. | A single-molecule barcoding system using nanoslits for DNA analysis. | Proc
Natl Acad Sci U S A. 2007 Feb 12; [Epub ahead of print] |
| Lin J, Sjoblom T. | Genome-wide mutational analyses of breast and colorectal cancers. | Discov
Med. 2007 Feb;7(37):13-9. |
| Ling KH, Rajandream MA, Rivailler P, et al. | Sequencing and analysis of chromosome 1 of Eimeria tenella reveals a unique segmental organization. | Genome
Res. 2007 Mar;17(3):311-9. Epub 2007 Feb 6. |
| Martin FN, Bensasson D, Tyler BM, Boore JL. | Mitochondrial genome sequences and comparative genomics of Phytophthora ramorum and P. sojae. | Curr
Genet. 2007 Feb 20; [Epub ahead of print] |
| Mashayekhi F, Ronaghi M. | Analysis of read length limiting factors in Pyrosequencing chemistry. | Anal
Biochem. 2007 Feb 13; [Epub ahead of print] |
| McKay SD, Schnabel RD, Murdoch BM, et al. | Construction of bovine whole-genome radiation hybrid and linkage maps using high-throughput genotyping. | Anim
Genet. 2007 Feb 15; [Epub ahead of print] |
| Mitchell DR, Mitchell JA. | Status of clinical gene sequencing data reporting and associated risks for information loss. | J
Biomed Inform. 2007 Feb;40(1):47-54. Epub 2006 Mar 15. |
| Morgante M, De Paoli E, Radovic S. | Transposable elements and the plant pan-genomes. | Curr
Opin Plant Biol. 2007 Apr;10(2):149-155. Epub 2007 Feb 14. |
| Newton IL, Woyke T, Auchtung TA, et al. | The Calyptogena magnifica chemoautotrophic symbiont genome. | Science.
2007 Feb 16;315(5814):998-1000. |
| Tenney AE, Wu JQ, Langton L, Klueh P, Quatrano R, Brent MR. | A tale of two templates: automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices. | Genome
Res. 2007 Feb;17(2):212-8. Epub 2007 Jan 8. |
| Warren RL, Sutton GG, Jones SJ, Holt RA. | Assembling millions of short DNA sequences using SSAKE. | Bioinformatics.
2007 Feb 15;23(4):500-1. Epub 2006 Dec 8. |
| Woo PC, Wang M, Lau SK, et al. | Comparative analysis of twelve genomes of three novel group 2c and group 2d coronaviruses reveals unique group and subgroup features. | J
Virol. 2007 Feb;81(4):1574-85. Epub 2006 Nov 22. |