Sequencing-Related
Papers of Note, March 2007
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Authors | Title | Citation |
Albert I, Mavrich TN, Tomsho LP, Qi J, Zanton SJ, Schuster SC, Pugh BF. | Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome. | Nature 2007 Mar 29;446(7135):572-6. |
Brennecke J, Aravin AA, Stark A, Dus M, Kellis M, Sachidanandam R, Hannon GJ. | Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. | Cell 2007 Mar 23;128(6):1089-103. Epub 2007 Mar 8. |
Challacombe JF, Altherr MR, Xie G, et al. | The Complete Genome Sequence of Bacillus thuringiensis Al Hakam. | J
Bacteriol. 2007 Mar 2; [Epub ahead of print] |
Endo K, Takahashi M, Masuko K, Inoue K, Akahane Y, Okamoto H. | Full-length sequences of subgenotype IIIA and IIIB hepatitis A virus isolates: Characterization of genotype III HAV genomes. | Virus
Res. 2007 Mar 19; [Epub ahead of print] |
Farrar MD, Howson KM, Bojar RA, West D, Towler JC, Parry J, Pelton K, Holland KT. | Genome Sequence and Analysis of a Propionibacterium acnes Bacteriophage. | J
Bacteriol. 2007 Mar 30; [Epub ahead of print] |
Feng L, Wang W, Cheng J, Ren Y, Zhao G, Gao C, Tang Y, Liu X, Han W, Peng X, Liu R, Wang L. | Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir. | Proc
Natl Acad Sci U S A. 2007 Mar 27;104(13):5602-7. Epub 2007 Mar 19. |
Fredriksson S, Baner J, Dahl F, Chu A, Ji H, Welch K, Davis RW. | Multiplex amplification of all coding sequences within 10 cancer genes by Gene-Collector. | Nucleic
Acids Res. 2007 Mar 13; [Epub ahead of print] |
Goh S, Ong PF, Song KP, Riley TV, Chang BJ. | The complete genome sequence of Clostridium difficile phage phiC2 and comparisons to phiCD119 and inducible prophages of CD630. | Microbiology.
2007 Mar;153(Pt 3):676-85. |
Jain M, Shrager J, Harris EH, Halbrook R, Grossman AR, Hauser C, Vallon O. | EST assembly supported by a draft genome sequence: an analysis of the Chlamydomonas reinhardtii transcriptome | Nucleic
Acids Res. 2007 Apr 1; [Epub ahead of print] |
Jeffries TW, Grigoriev IV, Grimwood J, et al. | Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. | Nat
Biotechnol. 2007 Mar;25(3):319-326. Epub 2007 Mar 4. |
Johnstone C, Nakagawa H. | Large-scale sequencing of the colorectal cancer genome unearths novel pathways to tumorigenesis and provides potential druggable targets for cancer therapy. | Gastroenterology. 2007 Mar;132(3):1186-9. |
Liu FX, Ruan XL, He YW, Li HP, Hu JS. | Complete nucleotide sequence of rice gall dwarf virus genome segment S7. | Arch
Virol. 2007 Mar 19; [Epub ahead of print] |
Mandoiu II, Prajescu C. | High-throughput SNP genotyping by SBE/SBH. | IEEE
Trans Nanobioscience. 2007 Mar;6(1):28-35. |
Oliynyk M, Samborskyy M, Lester JB, Mironenko T, Scott N, Dickens S, Haydock SF, Leadlay PF. | Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL2338. | Nat
Biotechnol. 2007 Apr;25(4):447-453. Epub 2007 Mar 18. |
Rusch DB, Halpern AL, Sutton G, et al. | The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific. | PLoS
Biol. 2007 Mar 13;5(3):e77 [Epub ahead of print] |
Smith MG, Gianoulis TA, Pukatzki S, Mekalanos JJ, Ornston LN, Gerstein M, Snyder M. | New insights into Acinetobacter baumannii pathogenesis revealed by high-density pyrosequencing and transposon mutagenesis | Genes
Dev. 2007 Mar 1;21(5):601-14. |
Trombetti GA, Bonnal RJ, Rizzi E, De Bellis G, Milanesi L. | Data handling strategies for high throughput pyrosequencers. | BMC
Bioinformatics. 2007 Mar 8;8 Suppl 1:S22. |
Weber AP, Weber KL, Carr K, Wilkerson C, Ohlrogge JB. | Sampling the Arabidopsis Transcriptome with Massively-Parallel Pyrosequencing. | Plant
Physiol. 2007 Mar 9; [Epub ahead of print] |
Xie G, Bruce DC, Challacombe JF, et al. | Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii. | Appl
Environ Microbiol. 2007 Mar 30; [Epub ahead of print] |
Zhang X, Henderson IR, Lu C, Green PJ, Jacobsen SE. | Role of RNA polymerase IV in plant small RNA metabolism. | Proc
Natl Acad Sci U S A. 2007 Mar 13;104(11):4536-41. Epub 2007 Mar 5. |