Microarray-Related Papers of Note (April 2008)
Journal Title Authors
American Journal of Human Genetics. 2008 Apr;82(4):903-15. SNP arrays in heterogeneous tissue: highly accurate collection of both germline and somatic genetic information from unpaired single tumor samples. Assie G, et al.
Analytical Chemistry. 2008 Apr 15;80(8):2849-56. Effects of microbead surface chemistry on DNA loading and hybridization efficiency. Jennings T, et al.
BMC Bioinformatics. 2008 Apr 10;9:187. Significance analysis of microarray for relative quantitation of LC/MS data in proteomics. Roxas B, et al.
BMC Bioinformatics. 2008 Apr 28;9(1):216 [Epub ahead of print] Normalization for triple-target microarray experiments. Martin-Magniette M, et al.
British Journal of Cancer. 2008 Apr 22;98(8):1403-1414. Acquisition of biologically relevant gene expression data by Affymetrix microarray analysis of archival formalin-fixed paraffin-embedded tumours. Linton K, et al.
Cancer Genetics and Cytogenetics. 2008 Apr 1;182(1):12-7. Detection of human papillomavirus genotypes with liquid bead microarray in cervical lesions of northern Chinese patients. Li Y, et al.
Clinical Genetics. 2008 Apr;73(4):353-9. Prader-Willi syndrome phenocopy due to duplication of Xq21.1-q21.31, with array CGH of the critical region. Gabbett M, et al.
International Journal of Food Microbiology. 2008 Apr 30;123(3):293-8. Evaluation of the Premi Test Salmonella, a commercial low-density DNA microarray system intended for routine identification and typing of Salmonella enterica. Wattiau P, et al.
Journal of Cancer Research and Clinical Oncology. 2008 Apr 8; [Epub ahead of print] Interobserver reproducibility of Gleason grading: evaluation using prostate cancer tissue microarrays. Burchardt M, et al.
Journal of Proteome Research. 2008 Apr 19; [Epub ahead of print] Development and validation of sandwich ELISA microarrays with minimal assay interference. Gonzales R, et al.
Journal of Proteome Research. 2008 Apr 4;7(4):1490-1499. Application of protein microarrays for multiplexed detection of antibodies to tumor antigens in breast cancer. Anderson K, et al.
Journal of the American Chemical Society. 2008 Apr 12; [Epub ahead of print] Critical influence of the location of the probe anchoring groups. Monot J, et al.
Molecular and Cellular Probes. 2008 Apr;22(2):115-21. Pre-filtering improves reliability of Affymetrix GeneChips results when used to analyze gene expression in complex tissues. Greco D, et al.
Molecular Psychiatry. 2008 Apr;13(4):417-28. Genotype patterns that contribute to increased risk for or protection from developing heroin addiction. Nielsen D, et al.
Nature Methods. 2008 Apr;5(4):307-9. Genome-wide mapping of allele-specific protein-DNA interactions in human cells. Maynard N, et al.
Nucleic Acids Research. 2008 Apr 1; [Epub ahead of print] A study of the relationships between oligonucleotide properties and hybridization signal intensities from NimbleGen microarray datasets. Wei H, et al.
Nucleic Acids Research. 2008 Apr 28; [Epub ahead of print] CoPub: a literature-based keyword enrichment tool for microarray data analysis. Frijters R, et al.
Nucleic Acids Research. 2008 Apr;36(6):e35. Highly cost-efficient genome-wide association studies using DNA pools and dense SNP arrays. Macgregor S, et al.
PLoS ONE. 2008 Apr 23;3(4):e1980. The T7-primer is a source of experimental bias and introduces variability between microarray platforms. Kerkhoven R, et al.
Transplant Immunology. 2008 Apr;19(1):81-5. Microarray analysis of MicroRNA expression in acute rejection after renal transplantation. Sui W, et al.